Watch file results
component: main
debian_mangled_uversion: 0.3.4
debian_uversion: 0.3.4
distribution: debian
last_check: 2025-12-12 00:51:53.360951
metadata: Reference: - Author: > Steve Hoffmann and Christian Otto and Stefan Kurtz and Cynthia M. Sharma and Philipp Khaitovich and Jörg Vogel and Peter F. Stadler and Jörg Hackermüller Title: > Fast Mapping of Short Sequences with Mismatches, Insertions and Deletions Using Index Structures Journal: PLoS Computational Biology Year: 2009 Volume: 5 Number: 9 Pages: e1000502 DOI: 10.1371/journal.pcbi.1000502 PMID: 19750212 URL: "https://journals.plos.org/ploscompbiol/article?id=\ 10.1371/journal.pcbi.1000502" eprint: "https://journals.plos.org/ploscompbiol/article/asset?id=\ 10.1371%2Fjournal.pcbi.1000502.PDF" - Author: > Steve Hoffmann and Christian Otto and Gero Doose and Andrea Tanzer and David Langenberger and Sabina Christ and Manfred Kunz and Lesca M Holdt and Daniel Teupser and Jörg Hackermüller and Peter F Stadler Title: > A multi-split mapping algorithm for circular RNA, splicing, trans-splicing and fusion detection Journal: Genome Biology Year: 2014 Volume: 15 Pages: R34 DOI: 10.1186/gb-2014-15-2-r34 PMID: 24512684 URL: > https://genomebiology.biomedcentral.com/articles/10.1186/gb-2014-15-2-r34 eprint: > https://genomebiology.biomedcentral.com/track/pdf/10.1186/gb-2014-15-2-r34 - Author: Christian Otto and Peter F. Stadler and Steve Hoffmann Title: Fast and sensitive mapping of bisulfite-treated sequencing data Journal: Bioinformatics Year: 2012 Volume: 28 Number: 13 Pages: 1698-704 DOI: 10.1093/bioinformatics/bts254 PMID: 22581174 URL: https://academic.oup.com/bioinformatics/article/28/13/1698/235152 eprint: > https://academic.oup.com/bioinformatics/article-pdf/28/13/1698/641879/bts254.pdf Registry: - Name: OMICtools Entry: OMICS_00683 - Name: bio.tools Entry: segemehl - Name: conda:bioconda Entry: segemehl - Name: SciCrunch Entry: SCR_005494
release: sid
source: segemehl
status: up to date
upstream_url: http://www.bioinf.uni-leipzig.de/Software/segemehl/downloads/segemehl-0.3.4.tar.gz
upstream_version: 0.3.4
version: 0.3.4-5
watch_file:
version=4 opts="uversionmangle=s/_/./g,repacksuffix=+dfsg,dversionmangle=s/\+dfsg//g,repack,compression=xz" \ http://www.bioinf.uni-leipzig.de/Software/segemehl/ .*/segemehl@ANY_VERSION@@ARCHIVE_EXT@ # opts="searchmode=plain,uversionmangle=s/_/./g,repacksuffix=+dfsg,dversionmangle=s/\+dfsg//g,repack,compression=xz" \ # May be we can use searchmode=plain to fetch "Download segemehl version 0.3"