Debian Quality Assurance

ants (2.2.0-1) [PTS] [DDPO]

NEW: VCS has unreleased changes: 2.4.3-1 > 2.2.0-1

• Git: https://anonscm.debian.org/git/pkg-exppsy/ants.git
• JSON
  Enter a full Vcs-* header, supported schemes are: Vcs-Bzr, Vcs-Cvs, Vcs-Darcs, Vcs-Git, Vcs-Hg, Vcs-Mtn, Vcs-Svn.
  For Vcs-Git append -b branch to select the branch name; append [subdir] if the debian/ directory is not in the repository root.
  The next upload will reset the information from the source package headers.
• Branch: master
• Path: debian/changelog
• Repo size: 67043328
• Browser: https://anonscm.debian.org/cgit/pkg-exppsy/ants.git
• Last scan: 2023-09-29 18:04:15+00
• Error: The Vcs URL is using anonscm.debian.org. Please update it for the move to salsa.debian.org.
• Next scan: 2023-09-30 17:06:00+00
• Debian changelog in Git:

  ants (2.4.3-1) UNRELEASED; urgency=medium
  
    * Team upload.
    * Take over package into Debian Med team maintenance
    * Remove debian/gbp.conf
    * Standards-Version: 4.6.2 (routine-update)
    * debhelper-compat 13 (routine-update)
    * Secure URI in copyright format (routine-update)
    * Remove trailing whitespace in debian/changelog (routine-update)
    * Remove trailing whitespace in debian/rules (routine-update)
    * Do not parse d/changelog (routine-update)
    * Add salsa-ci file (routine-update)
    * Rules-Requires-Root: no (routine-update)
    * watch file standard 4 (routine-update)
    * Build-Depends specifies only libpng-dev
      Closes: #819427
    * Fix watchfile to detect new versions on github (routine-update)
    TODO0: Move to Debian Med team
    TODO1: https://github.com/ANTsX/ANTs/issues/1353 (Closes: #909833 ... hopefully other bugs)
    TODO2: New upstream version has issues with ITK
  
   -- Andreas Tille <tille@debian.org>  Thu, 02 Mar 2023 07:48:40 +0100

• This branch is 85 commits ahead of tag debian/2.2.0-1
• Git log:

  commit e5be774fd5999cc0ce2061a7f80445d1a1807b76
  Merge: 6e57c915 cec1a7b1
  Author: Andreas Tille <tille@debian.org>
  Date:   Thu Mar 2 06:51:40 2023 +0000
  
      Merge branch 'dpo-guest-master-patch-39933' into 'master'
      
      SVN → Git
      
      See merge request med-team/ants!2
  
  commit 6e57c9153ebf1809ba1e548ae009c41a49497ec2
  Author: Andreas Tille <tille@debian.org>
  Date:   Thu Mar 2 07:50:12 2023 +0100
  
      Package should be moved to Debian Med team
  
  commit b09cb974aa7e85e7c2eff7a9e785f273a3421ff1
  Author: Andreas Tille <tille@debian.org>
  Date:   Thu Mar 2 07:49:37 2023 +0100
  
      TODO2: New upstream version has issues with ITK
  
  commit cec1a7b1a6600450f71518e0cb3a10ab0d124a17
  Author: Dimitri Papadopoulos Orfanos <dimitri.papadopoulos@gmail.com>
  Date:   Thu Mar 2 06:47:34 2023 +0000
  
      Update README.source
  
  commit fc414cd93ba33af90ecceb1f3443c8928d7157a1
  Author: Andreas Tille <tille@debian.org>
  Date:   Thu Mar 2 07:45:54 2023 +0100
  
      routine-update: Standards-Version: 4.6.2
  
  commit e5cf41ef2b6946262ba90671c970686edbbf8655
  Merge: cda3a74f 2bc21ad6
  Author: Andreas Tille <tille@debian.org>
  Date:   Thu Mar 2 07:45:54 2023 +0100
  
      Update upstream source from tag 'upstream/2.4.3'
      
      Update to upstream version '2.4.3'
      with Debian dir eb48e1db020dbc7646d1e254af4ce091026681cb
  
  commit cda3a74f15e7a2b82308846774a8d3ffc9f4b5e3
  Author: Andreas Tille <tille@debian.org>
  Date:   Thu Mar 2 07:45:48 2023 +0100
  
      routine-update: New upstream version
  
  commit 2bc21ad6715a4b796dc1b28ab86ccc575b615157
  Author: Andreas Tille <tille@debian.org>
  Date:   Thu Mar 2 07:45:48 2023 +0100
  
      New upstream version 2.4.3
  
  commit 0e666667d64f2351f34a7c5b8b1b735d220105f2
  Merge: fcc6c9e5 79a7e019
  Author: Andreas Tille <tille@debian.org>
  Date:   Thu Mar 2 06:33:18 2023 +0000
  
      Merge branch 'dpo-guest-master-patch-35193' into 'master'
      
      https://github.com/stnava → https://github.com/ANTsX
      
      See merge request med-team/ants!1
  
  commit a2946a15c7ae900d2f91bea66dcffede3d1f5e20
  Author: Dimitri Papadopoulos Orfanos <dimitri.papadopoulos@gmail.com>
  Date:   Thu Mar 2 06:21:38 2023 +0000
  
      SVN → Git
  
  commit 79a7e0195ec4ad5a5d30ac48098e552e0a35b1c5
  Author: Dimitri Papadopoulos Orfanos <dimitri.papadopoulos@gmail.com>
  Date:   Thu Mar 2 06:16:28 2023 +0000
  
      https://github.com/stnava → https://github.com/ANTsX
  
  commit fcc6c9e52230e0ba3859a8bc06475c11b7a54534
  Author: Andreas Tille <tille@debian.org>
  Date:   Wed May 4 17:08:35 2022 +0200
  
      Update todo
  
  commit e5bbff27b3a8bbb1b30fc6d28d1c6cca70f5ef86
  Author: Andreas Tille <tille@debian.org>
  Date:   Wed May 4 16:19:39 2022 +0200
  
      Fix changelog
  
  commit fba85135d2b3e35c725421dbe02440480b1b7cba
  Author: Andreas Tille <tille@debian.org>
  Date:   Wed May 4 16:14:07 2022 +0200
  
      routine-update: Standards-Version: 4.6.0
  
  commit a0404d482e1f9369866e30e871d0016011a82554
  Author: Andreas Tille <tille@debian.org>
  Date:   Fri Aug 13 07:34:42 2021 +0200
  
      TODO: needs insighttoolkit5
  
  commit d6629bb4c131bda1a47c2f44ca9cfd8ea9f9be7a
  Author: Andreas Tille <tille@debian.org>
  Date:   Fri Aug 13 07:28:58 2021 +0200
  
      Refresh patch
  
  commit 8bad7dd973ec8d297aaa983d081ea929ebec1a55
  Merge: 98b3c8b6 25af4dce
  Author: Andreas Tille <tille@debian.org>
  Date:   Fri Aug 13 07:20:14 2021 +0200
  
      Update upstream source from tag 'upstream/2.3.5'
      
      Update to upstream version '2.3.5'
      with Debian dir 47479f84b7edae7b0547533bfc064630b9c5a2e8
  
  commit 25af4dce1c9a715c18242af71e5a78ab51358146
  Author: Andreas Tille <tille@debian.org>
  Date:   Fri Aug 13 07:20:05 2021 +0200
  
      New upstream version 2.3.5
  
  commit 98b3c8b6d9a81aa8802a78beb6f935cb3b14ee3b
  Author: Andreas Tille <tille@debian.org>
  Date:   Fri Aug 13 07:20:05 2021 +0200
  
      routine-update: New upstream version
  
  commit 92a2a82781ce737abddaaeec73603c585073b2cb
  Author: Andreas Tille <tille@debian.org>
  Date:   Fri Aug 13 07:20:02 2021 +0200
  
      routine-update: Fix watchfile to detect new versions on github
  
  commit d0a3389ad36c2e8c106beffa935c8c1537490d83
  Author: Andreas Tille <tille@debian.org>
  Date:   Mon Dec 7 17:22:24 2020 +0100
  
      Close bug
  
  commit 354ad798059b011d9d093e6413345d09d8ec34d8
  Author: Andreas Tille <tille@debian.org>
  Date:   Mon Dec 7 17:18:03 2020 +0100
  
      Update patches
  
  commit 3f447ff5832b8c40748c2997c114505b697c7fc7
  Merge: 7ad9491d a231a09a
  Author: Andreas Tille <tille@debian.org>
  Date:   Mon Dec 7 17:15:07 2020 +0100
  
      Update upstream source from tag 'upstream/2.3.4'
      
      Update to upstream version '2.3.4'
      with Debian dir 028a2042abe94c108e313207b215defd41eeffb8
  
  commit a231a09a6a35d230aa48cad51bef33b63be3a81d
  Author: Andreas Tille <tille@debian.org>
  Date:   Mon Dec 7 17:14:58 2020 +0100
  
      New upstream version 2.3.4
  
  commit 7ad9491d5302c424d8f5e8322fcb8dfa7534daa6
  Author: Andreas Tille <tille@debian.org>
  Date:   Mon Dec 7 17:14:13 2020 +0100
  
      routine-update: watch file standard 4
  
  commit 41c9907d675a1f7021fd866383c658133e305dc8
  Author: Andreas Tille <tille@debian.org>
  Date:   Mon Dec 7 17:13:51 2020 +0100
  
      routine-update: Rules-Requires-Root: no
  
  commit 1159640716109654a640f0c4277b37aa2439fbb7
  Author: Andreas Tille <tille@debian.org>
  Date:   Mon Dec 7 17:13:51 2020 +0100
  
      routine-update: Add salsa-ci file
  
  commit 3fead78e1394ceab5a3d068c506c4dc50eec2cd5
  Author: Andreas Tille <tille@debian.org>
  Date:   Mon Dec 7 17:13:51 2020 +0100
  
      routine-update: Do not parse d/changelog
  
  commit bf7634c038acaa467e0b7ede6a7b6dd23e2e72d8
  Author: Andreas Tille <tille@debian.org>
  Date:   Mon Dec 7 17:11:13 2020 +0100
  
      routine-update: Remove trailing whitespace in debian/rules
  
  commit 0e84704cc81304368b122a5092c0084c7985d209
  Author: Andreas Tille <tille@debian.org>
  Date:   Mon Dec 7 17:11:13 2020 +0100
  
      routine-update: Remove trailing whitespace in debian/changelog
  
  commit 9b9eb36482236ca8586175cdd0ae73a2d645fe8e
  Author: Andreas Tille <tille@debian.org>
  Date:   Mon Dec 7 17:11:13 2020 +0100
  
      routine-update: Secure URI in copyright format
  
  commit 7add5ad1228dcdeceb94049014eb3d9aa3ec70ba
  Author: Andreas Tille <tille@debian.org>
  Date:   Mon Dec 7 17:09:32 2020 +0100
  
      routine-update: debhelper-compat 13
  
  commit 0b982d2d6b6d426f67ae473f51bae6c04081bbe4
  Author: Andreas Tille <tille@debian.org>
  Date:   Mon Dec 7 17:09:32 2020 +0100
  
      routine-update: Standards-Version: 4.5.1
  
  commit 2a9cd75ae41fb860800f71b2244ce7d431bbfa5a
  Author: Andreas Tille <tille@debian.org>
  Date:   Mon Dec 7 16:37:23 2020 +0100
  
      routine-update: New upstream version
  
  commit c7453e3809bf098e2ef7ae55ea2980b26fec9ab8
  Author: Andreas Tille <tille@debian.org>
  Date:   Mon Dec 7 16:36:36 2020 +0100
  
      Remove debian/gbp.conf
  
  commit 4cf00f6045a3f1c7a6fe4a19ddc655dea5a4115f
  Author: Andreas Tille <tille@debian.org>
  Date:   Mon Dec 7 16:36:08 2020 +0100
  
      Take over package into Debian Med team maintenance
  
  commit ea5551ddecc84119cb14875cd4b00503abbac81a
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Fri Mar 9 02:48:21 2012 +0000
  
      ENH:  Manually merged Kent's changes for decoupling I/O from algorithm.
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1193 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit d10d9a05c83916b56a9a671a746bc10d0be41a8b
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:14:17 2012 +0000
  
      STYLE: Minor style improvements for ITKv4.
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1192 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 0d4124a6187a74020198726df997b011e2560e83
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:14:16 2012 +0000
  
      ENH: Prepare for merge with svn master.
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1191 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 9957c1fa5dccda0161b8d80745ef1b419ebc3832
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:14:14 2012 +0000
  
      ENH: Moved fixed & moving file IO out of helper class
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1190 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 0cf0261daf7902653dd121fcd232241252531b8f
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:14:09 2012 +0000
  
      ENH: Add method to use images instead of image filenames for fixed and moving images
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1189 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit ec3bec2423e08cacc16471f9c47c0a92c625af23
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:14:02 2012 +0000
  
      ENH:  Initialized variables deterministically
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1188 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit f287ec6d4c2289fd4bd7ee9fd90868bd202b6b83
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:13:53 2012 +0000
  
      BUG: wasn't setting histogram match
      ENH: allow setting output for logging to other than std::cout
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1187 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 793dd2cb07a9e5c7f7359c7fcddb82ebf3be1f80
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:13:51 2012 +0000
  
      BUG: replaced status messages lost in refactoring
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1186 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit f1077b67b11d80987c7db79ccab5b0e1f004ce8b
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:13:50 2012 +0000
  
      BUG: added printstate method & set more required parameters
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1185 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 58b6cd9691fc5ec05f1d450e94fdc6f05c743b7d
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:13:48 2012 +0000
  
      ENH: Instrumented with debugging statements.
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1184 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 6d632434e863db596e5b940131b0550b18e36d19
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:13:47 2012 +0000
  
      BUG: Ordering error caused some variable to be uninitialized.
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1183 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit e344641230d6454f25405ce0ab277d5ac17d4daa
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:13:45 2012 +0000
  
      DOC: Change name to SyN to match documentation.
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1182 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 0814da0d000fbc49cbabac28df29a5e5d3a72f29
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:13:44 2012 +0000
  
      BUG: Command line arg was not propogated properly
      
      STYlE: Removed shadow typedef warnings by
      renaming the local enumeration type.
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1181 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit e20bdcba821d76920db4bd08a48f2e9f79623f65
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:13:42 2012 +0000
  
      ENH: added methods to retrieve results from registrationHelper
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1180 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit dfafad5396e92a0d2aa764e0c4050b645a5eca74
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:13:40 2012 +0000
  
      ENH: Make itk::ants::RegistrationHelper a template class, add interface to retrieve transform and warped images after calling doRegistration.
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1179 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit ac9bc01d55de3048c76ada0f66b5afb5a6084d72
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:13:39 2012 +0000
  
      COMP: Made RegistrationHelper class templated
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1178 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit cec33af9d0ab6c2bce055adf4c4d5001791c9414
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:13:37 2012 +0000
  
      COMP: Finished up on re-doing antsRegistration
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1177 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 35d050ae7934a6d6b8e5e80274c375c8555bf1ec
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:13:35 2012 +0000
  
      COMP: Remove SetDo(Fixed|Moving)ImagePreWarp calls
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1176 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 1f139ae5dd568a2002fd0f75315788fa6161399f
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:13:34 2012 +0000
  
      ENH: Beginning to re-write antsRegistration
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1175 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit abc9d255cedddce19f960b54062a3ed7201cb1a9
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:13:32 2012 +0000
  
      ENH: added itkantsRegistrationHelper class
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1174 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 0cfd1d589124410ed5e8477b55354b0caa11b688
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:13:27 2012 +0000
  
      COMP: add nightly dashboard script
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1173 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit ec9cbbf0b8f63e5997909cb151485cb6a76abfc6
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 8 00:13:25 2012 +0000
  
      COMP: Removed as many of the warnings generated by gcc 4.6 as possible
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1172 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit a8a397827ddc08cb50937516c7786ffee6249680
  Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Wed Mar 7 20:47:15 2012 +0000
  
      ENH: interface to multiple cgspca
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1171 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit e18d9103d778f9edad868dd4823bfe357d9305c6
  Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Wed Mar 7 20:14:04 2012 +0000
  
      ENH: interface to multiple cgspca
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1170 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 68ab4cea219a0d999bb3223e1438bdee13f69cc8
  Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Wed Mar 7 19:53:56 2012 +0000
  
      ENH: interface to multiple cgspca
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1169 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 04b5b5c9a45b4d60c18f36b205fe8813f9dd2c00
  Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Wed Mar 7 18:33:52 2012 +0000
  
      ENH: interface to multiple cgspca
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1168 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 77b8770cecaf9878eb9fff65f083e55b3d15d82f
  Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Wed Mar 7 01:11:09 2012 +0000
  
      ENH: to eigenanatomy algorithm nrepspervec and also network decomposition
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1167 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit e5153bf6ece844268cee84b7315e0bbd5966a449
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Tue Mar 6 03:03:27 2012 +0000
  
      ENH: Remove deprecated ImagePreWarp optoins.
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1166 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 9675a627b00256d660290ddc4d8c19797681cd6e
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Tue Mar 6 02:32:16 2012 +0000
  
      ENH: Updated ITK to latest merged fixes for registration.
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1165 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit c357236fdea0d43fe18cb1f9b99391fbbf0879e5
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Mon Mar 5 02:26:31 2012 +0000
  
      ENH: Allow transforms to have .mat extensions.
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1164 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 072004af232b4fa8bd7cb0ca603c2dd6b8174033
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Sun Mar 4 22:01:27 2012 +0000
  
      ENH: Updated ITK to include patch #12 from Nick Tustison's gerrit patch.
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1163 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit c4648ea405fc91f6f8904a0785a4f3f13b2c85c8
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Sun Mar 4 22:01:22 2012 +0000
  
      COMP:  Fixed compilation errors and warnings on clang.
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1162 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 6e675d46e4436f018d52fac3ddb9b650c4c82fa0
  Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Fri Mar 2 22:53:58 2012 +0000
  
      ENH: optimization restarting---improves reconstruction error and significance
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1161 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit b68bb6553ff77f9789384766988a89c47115d967
  Author: ntustison <ntustison@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Fri Mar 2 19:44:22 2012 +0000
  
      ENH:  Facilitate double/float interchange.
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1160 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 9a1479cae79d2074ae66941cf7e96a5963381abc
  Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 1 20:25:13 2012 +0000
  
      ENH: Miccai results
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1159 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 33d72c412c035826393b45da9faed7fb59ab035b
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 1 17:11:22 2012 +0000
  
      ENH: Updated to new version of antsResample.cxx with new ITKv4 features.
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1158 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit e70e4c51cbb0c19c253b26f235a960e9dfdbdf4d
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 1 17:11:19 2012 +0000
  
      COMP: Added CTest for Iowa ANTS Dashboard
      COMP: Removed a couple of warnings
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1157 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 8ba28f34cd9532437cc188cc6c69cf5c846f77e6
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 1 17:11:15 2012 +0000
  
      COMP: Removed as many of the warnings generated by gcc 4.6 as possible
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1156 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 6e405e90868497bba13956da9ee9defd23c111aa
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Thu Mar 1 17:11:02 2012 +0000
  
      COMP: remove obsolete flag from VTK Config so gcc 4.3+ & llvm-gcc work on OS X
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1155 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 45d54844eb9b53d8071538bb965bd9be0958e556
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Wed Feb 29 14:14:44 2012 +0000
  
      COMP: Need to limit scope of variables in switch
      
      This error occurs when a vairable declared inside
      a switch statement is not explicitly limited to one case.
      
      error: switch case is in protected scope
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1154 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 3b6348e7215c1733cb37aa1f87eefb95d93eec40
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Wed Feb 29 14:14:41 2012 +0000
  
      STYLE:  Re-formatted all files to match ITK style
      
      The intent of this patchset is to clean the files
      to make them KWSTYLE compliant with the ITKv4 style checker
      
      The goal of this script is to develop a consistent system of
      auto-formating and format testing such that if uncrustify is run,
      then the code will pass the KWStyle format checker
      
      http://www.itk.org/Wiki/ITKv4_StyleChangeProposal
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1153 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 87c0dfdc7d5865f9e10c837c31c51303925f0e39
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Wed Feb 29 02:39:17 2012 +0000
  
      COMP: get rid of CLang compiler warnings
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1152 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 0f1c6f0303a32be1ac0dfd476c644998b9ecceb3
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Wed Feb 29 02:38:56 2012 +0000
  
      COMP: Change baseline metrics so as to get passing tests
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1151 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 294be2f76db2eafd2d72f568b6cea4e36bef1f83
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Wed Feb 29 02:38:52 2012 +0000
  
      COMP: Address compiler warnings.
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1150 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 4fb624170fdb8fab3dde9ae7b9755880812ab918
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Wed Feb 29 02:38:33 2012 +0000
  
      COMP: Reformat add_test commands to make them more readable.
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1149 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 4160ff2866475fce38b4b0e5241f1a1098f48893
  Author: hjmjohnson <hjmjohnson@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Mon Feb 27 20:57:47 2012 +0000
  
      COMP: mistake image filename in top level make causing several test failures with segfault
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1148 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 8ca4b388cf5281adad81d1565433af385509adca
  Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Sun Feb 26 20:18:22 2012 +0000
  
      ENH: add line search to greedy eanat
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1147 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 067f191e6e84ced1ed62a69cadddcf8eba52a71d
  Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Sun Feb 26 19:39:59 2012 +0000
  
      ENH: add line search to greedy eanat
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1146 fd2da0a4-d968-48df-9cb5-d8c496287cbf
  
  commit 5764313edcd0a3614630d4fa6c92491e4ff393cd
  Author: stnava <stnava@fd2da0a4-d968-48df-9cb5-d8c496287cbf>
  Date:   Sun Feb 26 19:38:53 2012 +0000
  
      ENH: add line search to greedy eanat
      
      git-svn-id: https://advants.svn.sourceforge.net/svnroot/advants@1145 fd2da0a4-d968-48df-9cb5-d8c496287cbf

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