dipy (0.14.0-1)
[PTS] [DDPO]
NEW: VCS has unreleased changes: 0.14.0-2 > 0.14.0-1
- Git: git://anonscm.debian.org/pkg-exppsy/dipy.git
-
- Branch: debian
- Path: debian/changelog
- Browser: http://anonscm.debian.org/gitweb/?p=pkg-exppsy/dipy.git
- Last scan: 2019-11-15 10:13:02+00
- Error: The Vcs URL git://anonscm.debian.org/pkg-exppsy/dipy.git is deprecated/defunct, https://anonscm.debian.org/git/pkg-exppsy/dipy.git was tried instead. Please update the Vcs field in debian/control.
- Next scan: 2019-11-16 12:16:00+00
- Debian changelog in Git:
dipy (0.14.0-2) UNRELEASED; urgency=medium
[ Yaroslav Halchenko ]
* debian/
+ provide python3 packaging
+ suggest python-dipy-doc (Closes: #849904)
[ Andreas Tille ]
* cme fix dpkg-control
-- Yaroslav Halchenko <debian@onerussian.com> Thu, 12 Jul 2018 11:59:34 -0400
- This branch is 529 commits ahead of tag 0.15.0
- Git log:
commit 0840f3f187a3691b08edf4def8daf89c5382c082
Author: Andreas Tille <tille@debian.org>
Date: Fri Jan 25 23:19:45 2019 +0100
Restore versioned Build-Depends: python3-nibabel (>= 2.1.0)
commit 285c61e7fcf016d15a0f6669ae0dbfdd3e7f7f0d
Author: Andreas Tille <tille@debian.org>
Date: Fri Jan 25 21:28:51 2019 +0100
cme fix dpkg-control
commit 2471c331e98a5a1284ce00ba0dfaccec47c6fcdd
Author: Andreas Tille <tille@debian.org>
Date: Fri Jan 25 21:23:55 2019 +0100
0.14.0-2 is actually unreleased
commit 2e45f1d63e5de9f512b7cec39808bc4b7eaf5855
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Sat Dec 22 21:57:35 2018 -0500
Refreshed deb_allow_older_cython patch
commit f51d359eb1ed9ed5e70cf5589884e1e1a1f0edf2
Merge: af2aef8d 98fa5b85
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Sat Dec 22 21:56:37 2018 -0500
Merge tag '0.15.0' into debian
Release 0.15
* tag '0.15.0': (570 commits)
bump version to 0.15.0
typo
adress ariel comment
highlight update
update copyright date
update changelog
update description
update 1 author
update information
remove default
update affine
fix tests
use load_nifiti
normalize snr workflow
normalize positional args name
pep8
typo + pep8
replace Nifti1Image by save_nifti
replace Nifti1Image by save_nifti
fix typo
...
commit af2aef8d9c0d7a5bf95febec4c95a573cbaa9705
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Sat Dec 22 21:56:23 2018 -0500
initial crack at python3- pkg, found uncomitted so probably incomplete
commit 3b682ffb18ba04ef8f63d165fbf9e7db341d4648
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Tue May 15 00:09:07 2018 -0400
build-depend on python-numpydoc
commit 5f835d414a43f1938ae7666ca0beb11feb0b384b
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Mon May 14 15:49:04 2018 -0400
minor fix for dh invocation
commit f4aada0c438ce2938048fcd98550a623e371b39a
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Mon May 14 15:45:14 2018 -0400
changelog, recythonized, debhelper boost to 9
commit 42e33cc1795137420285d988447562674b9b17a5
Merge: 8ea6d14a 3ba16b98
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Mon May 14 14:04:42 2018 -0400
Merge tag '0.14.0' into debian
Release 0.14.
* tag '0.14.0': (538 commits)
release setup
update authors
update and add all important information for the release
fix tests precision for test_whole_brain_slr.
remove range on plot and rotate odf_actor
improve some figure
life correction
syntax correction
rename bootstrap example file
replaced copy_point for newdir it is memory view
changed back np.full, not supported in numpy 1.7.1
RF - following copy_point(.) moved to fast_numpy
RF - moved the copy_point(.) to fast_numpy and used it for dgs
Minor issue corrected
Added RandomState inside RecoBundles
RF - uses np.full to generate bvals vector
RF - code clean up
DOC - fixed typos
RF - while to for loop
Corrected number of return objects if no neighbors are found
...
commit 8ea6d14ad3fe117b38ebf3058b771a989e1d75f9
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Sat Nov 25 00:42:14 2017 -0500
debian/patches/1300.diff to mitigate failing tests on 32bit
commit 080bf2badfcaefc0b4e456ed3f73d88a44e98f62
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Wed Nov 22 21:23:58 2017 -0500
debian/control - python-h5py was added to (Build-)Depends and python-tables was removed from Depends
commit 479bf9384645b3f8bd0dc69588aea2f60ca3acd5
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Wed Nov 22 20:26:43 2017 -0500
cythonized and changelog
commit 7413db790c836e781bb94a4e4df6d549f4c6b5b3
Merge: 05e03071 25036c7c
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Wed Nov 22 19:06:43 2017 -0500
Merge tag '0.13.0' into debian
Release 0.13.0
* tag '0.13.0': (165 commits)
Last commit before release 0.13.0
date update and adding last issue/PR
BF: Import Streamlines object directly from nibabel.
update release 0.13 information
remove comment on installation
update installation from source instructions
Anaconda typo change + link
add some dependency on issue template info
adding a citation
DOC: Add a coding style guideline.
adding some citations
small correction on issue template
adding issue template
add visual studio build tools on link names
update windows and osx instructions
switch references order
Update tracking_quick_start.py
Fix bug in default position
Replace build_textblock with constructor calls
Added parameters to the constructor of TextBlock2D
...
commit 05e03071e9d3a321d92297304bd3e22b2fc84192
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Mon Jul 10 18:14:44 2017 -0400
BF: copy examples doc any doc-examples/ subdir, exclude test_fetcher tests
commit b5cf9815f127b0dbc57f48ef80040b4763e8c759
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Mon Jul 3 23:28:21 2017 -0400
Fresh upstream release - upstream requires cython >= 0.25.1 for recythonization
commit 434d37d70cc89cf351889174883165c6cd92e8ea
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Mon Jul 3 23:27:32 2017 -0400
recythonized
commit d68e2388f9793a3d7232eac9c8f4d294041afa9b
Merge: 2d3036ac 20a71d57
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Mon Jul 3 21:19:22 2017 -0400
Merge tag '0.12.0' into debian
Release 0.12
* tag '0.12.0': (1296 commits)
Changed info.py to release 0.12.0
BF: added callbacks for sliders in viz_iu.py
Reduce precision error
Added two extra rows in Changelog
Replaced some names in release0.12.rst
More updates in mailmap
Updated mailmap too
Minor typo change
Updated release 0.12 file
Updated index.rst file
Updated api changes file
Updated Changelog
new release info (0.12.0)
DOC: quick start tracking tutorial done
DOC: using now new Streamlines API
Updated quick start tracking tutorial
DOC: updated examples_index.rst
small correction for debugging purpose on nlmeans
DOC: inferno
Remove duplicate code. Clean up some formatting.
...
commit 2d3036ac66dc40e74ce07c07667bb7fffb2bd3ff
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Mon Feb 22 11:59:52 2016 -0500
bringing formatting back and adjusting proposed descriptions
commit dfb19a90b1d98d5e319712c7c9497f4a85767746
Merge: d19f1687 8e18c242
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Mon Feb 22 11:53:34 2016 -0500
Merge remote-tracking branch 'gh-neurodebian/debian' into debian
* gh-neurodebian/debian:
Updated description for DIPY
commit 8e18c242389a5773e437da4fc72885f3626d1d99
Merge: 0242ea5a a7030c8f
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Mon Feb 22 11:53:12 2016 -0500
Merge pull request #1 from Garyfallidis/debian
Updated description for DIPY
commit a7030c8f9ec4f582721d6f74e80899cafafc5702
Author: Eleftherios Garyfallidis <garyfallidis@gmail.com>
Date: Mon Feb 22 11:42:07 2016 -0500
Updated description for DIPY
commit d19f1687f9fab3da23f036cab0d77e1f84bf4a2c
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Sun Feb 21 19:58:56 2016 -0500
boost policy to 3.9.7 (no extra changes)
commit 3fbf9b9b9eb41cc996c90bd54d25f17ca39c12a3
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Sun Feb 21 19:57:42 2016 -0500
debian/control - changed Priority to extra to be inline with suite overrides
commit 0b4f1842db2fe6e3a33f77825fd98b213b273f26
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Sun Feb 21 19:51:39 2016 -0500
refreshed patch
commit 457dbf0972f7922ff53f3374beea07e151e4cc65
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Sun Feb 21 19:11:20 2016 -0500
Dropping patches which came from upstream for numpy/scipy compatibility workarounds + changelog
commit f7e1915686f0b3e43e70f1a87f05099d79e7f818
Merge: 0242ea5a bf4dfccd
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Sun Feb 21 19:09:32 2016 -0500
Merge commit '0.11.0-2-gbf4dfcc' into debian (0.11.0 in releases branch)
* commit '0.11.0-2-gbf4dfcc': (208 commits)
Update version number for the release.
DOC: Remove ominous warning.
DOC: Update github stats for 0.11 as of today.
Updated dates
Update utils.py
fix typos
Fix PEP8 in top-level tests
fix typo
BF: cross platform path handling.
Improve readibility in test_expectmax
Fix PEP8 in test_expectmax
Small correction in examples-index
Updated developers
DOC: typos removed (and pep8)
Updated developers
DOC: corrected links and added some comments as requested at issue 900
Kurtosis example was missing from files, now added
RF: updated examples_index.rst
Minor check
Updated index.rst with new release info
...
commit bf4dfccd873890ec3cdbcff4013d8f1e20a3b457
Merge: d7a7e854 aedfb34b
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Sun Feb 21 19:09:18 2016 -0500
Merge tag '0.11.0' into releases
Release 0.11
* tag '0.11.0': (208 commits)
Update version number for the release.
DOC: Remove ominous warning.
DOC: Update github stats for 0.11 as of today.
Updated dates
Update utils.py
fix typos
Fix PEP8 in top-level tests
fix typo
BF: cross platform path handling.
Improve readibility in test_expectmax
Fix PEP8 in test_expectmax
Small correction in examples-index
Updated developers
DOC: typos removed (and pep8)
Updated developers
DOC: corrected links and added some comments as requested at issue 900
Kurtosis example was missing from files, now added
RF: updated examples_index.rst
Minor check
Updated index.rst with new release info
...
commit aedfb34be08d4f5dc0b5bb55a2b2741b6a9ff9a7
Author: arokem <arokem@gmail.com>
Date: Sun Feb 21 10:29:53 2016 -0800
Update version number for the release.
commit 0242ea5aafc102a8293725726c31c42f20d06caf
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Mon Feb 8 20:04:47 2016 -0500
debian/patches/up_numpy_compat-PR858.patch - for compatibility with numpy 1:1.11.0~b2
commit 7711cf0491546a97bc94e92bd8fd50a6e37c3e56
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Tue Feb 2 18:09:31 2016 -0500
refreshed patch and mandaed min numpy version to be 1.7.1
commit ce0813558c1bb39ef62629dd3318f7b371399b28
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Tue Jan 26 23:30:06 2016 -0500
refreshed patch, adjusted changelog for new release
commit d49908f5cf631b986934d3418bd5ec991cd89461
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Tue Jan 26 23:27:10 2016 -0500
recythonized for older backports
commit 7635a44b93419093e33508354a4863bf0b371471
Merge: b55dfeda d7a7e854
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Tue Jan 26 23:24:37 2016 -0500
Merge tag '0.10.1' into debian
Release 0.10.1
* tag '0.10.1': (970 commits)
Update changelog again. Set version number for the release.
TST: Add a test for TripWire.
DOC: Update minimum dependency for numpy, mailing list.
Bumping up to 0.10.1 for maintenance development.
Also - bumping to 0.10.1
BF: Tripwire subclass AttributeError.
TST: add Python 3.5 to travis-ci test matrix
Set version number for release.
Updated change log.
DOC: Clarification of Python 2/3 issues.
RF: Change streamtube default thickness so that they don't look awful.
BF: Import
TST: Also skip appropriately in viz.window.
TST: A couple more tests that need to be skipped with TEST_WITH_XVFB='skip'
DOC: More elaboration on different compiler options for MAC OSX.
DOC: Clarify the installation routes for clang/OMP on MAC OSX.
More specific about where to add compiler configuration.
Don't need nibabel source on PYTHONPATH (but needs to be installed).
DOC: Installation, added RNH to list of contributors.
TST: Make skipping with TEST_WITH_XVFB=skip more explicit.
...
commit b55dfeda3c507190ba11697cf00d549b70245d3a
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Tue Jan 26 22:53:38 2016 -0500
Let's try to build for sid and be done ;)
commit d7a7e8542626aa743b3a3c44fbeafa537fe7172c
Author: arokem <arokem@gmail.com>
Date: Fri Dec 4 14:42:05 2015 -0800
Update changelog again. Set version number for the release.
commit 39dde30b7a1571fd7fd39ef2c850f566004bac1c
Author: Michael Hanke <mih@debian.org>
Date: Wed Aug 26 21:21:14 2015 +0200
Include upstream patch to address one of the two test failures on sid
commit 81e40f5604095db334000523c7e63c90cec4a1c0
Author: Michael Hanke <mih@debian.org>
Date: Tue Aug 25 21:07:37 2015 +0200
Release to unstable
commit e17a813371f47597d6a1a5998a3ab20521227644
Author: Michael Hanke <mih@debian.org>
Date: Tue Aug 25 20:33:45 2015 +0200
Enable reproducible builds
commit f768afd57614e2e609deded6d473b8160f273d05
Author: Michael Hanke <mih@debian.org>
Date: Tue Aug 25 20:31:53 2015 +0200
Update maintainer email
commit cd90c9dc4dbe755313d8b6faae7582ee68f1528c
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Thu Mar 19 23:03:08 2015 -0400
debian/control - limit to python >= 2.7 to avoid problem while testing scripts while having two Python versions supported
(see https://github.com/nipy/dipy/issues/354#issuecomment-69251564)
commit b05bd4d8319b7151bbe02eea53ec87bf78132007
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Thu Mar 19 22:59:35 2015 -0400
cythonized and new changelog
commit 2a4e568a08a7e419c1c1e81e59fc21f669f303d3
Merge: 562a3c12 f35702c9
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Thu Mar 19 22:52:38 2015 -0400
Merge tag '0.9.2' into debian
Sixth public release
* tag '0.9.2': (209 commits)
Updated info and changelog
BF: moved cythonutils.h to src directory
Changed release to 0.9.1 because pypi didn't allow an update of 0.9.0
BF: added header file for cythonutils in setup.py
Updated info.py with release version
DOC: we're (spelled) big now.
DOC: Detailed github stats for 0.9
Removed the word new
Minor change in SFM in Changelog
Minor fixes in Changelog
Realise mode: updating Changelog and Authors
Use assert_array_almost_equal instead of assert_array_equal
BF: Some versions (<0.18) of numpy don't have nanmean.
BF: use dpy_rint instead of round for Windows
DOC: Add link to memory profiling.
Use int instead of float with except
DOC: Warn that computing this might require some memory.
RF: pyflakes.
RF: Comment out debugging statements.
RF: Back to arrays. Seems like the best way to go for now.
...
commit 562a3c12984fabbd0eb42a21232832e051701a40
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Wed Jan 7 19:47:27 2015 -0500
fixed up paths to .so files and renamed to PACKAGE2_NAME so rm *.so works
commit 4b078496b973100720db61865121e58f4bf81e78
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Wed Jan 7 18:29:02 2015 -0500
changelog and minor copyright tune ups
commit 84913df9347fbe635df77c4a9ba0b6046b0c6f65
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Wed Jan 7 18:26:06 2015 -0500
trying to migrate away from pysupport to dh_python2
commit 2e3430f9ba42373f06e27715773cbe319056441d
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Wed Jan 7 18:15:44 2015 -0500
updated cythonized files
commit 08383e50cb38d925f19c18d7b97dbc95e01f169c
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Wed Jan 7 17:10:31 2015 -0500
changelog and enabling examples again
commit 616d014386eb09c1e62207d2c9f3ea85dfcc44f7
Merge: 93fd34ff 4f5dc204
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Wed Jan 7 16:54:07 2015 -0500
Merge tag '0.8.0' into debian
A truly remarkable release
* tag '0.8.0': (26 commits)
Update changelog and info.py for 0.8 release
Some additions to the release notes.
Whitespace.
RF: integer division in making lattice grid
RF: adapt dipy test runner to possibility of mpl
BF+TST: fix sampling_shape again; fix smoke tests
DOC+RF: rewrite, expand docstrings, reformat
RF: add matplotlib rc file to disable figures
TST: Beginning some testing for regtools.
DOC+RF: add more comments to tests
RF+TST: use numpy approved data get / flag checks
DOC: more docstring fixes
remove unused mgrid variables from plot_2d_diffeomorphic_map
RF: remove unused inline functions
DOC: refactor propspeed docstrings / whitespace
plot_2d_diffeomorphic_map: only call savefig() if show_figure is True
regtools.py PEP8 formatting
auto-convert sampling_shape to an int32 array
NF: add requirements.txt file
RF: Apply the changes to EuDX to the life validation script.
...
commit 93fd34ff0358c329a4fd0842bc3a775b78d744f9
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Tue Dec 30 11:26:17 2014 -0500
debian/rules - clean away Cython generated files
commit 3b1370de0f3eda6e439a1bbef7f0b63b2bfdb277
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Tue Dec 30 11:23:05 2014 -0500
install any/all README.*s
commit 8b4553d0cd276be674039ee7ff6156e08e0f9398
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Tue Dec 30 01:39:05 2014 -0500
temporarily do not install examples
commit 7e2c1913db507e3d3d1ccaf0755a31dce4a9130c
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Mon Dec 29 22:46:17 2014 -0500
reverting somehow managed to get in divergance from upstream in dipy/info.py
commit e261295bb239b30ddff8215ed25312b2073239d7
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Mon Dec 29 22:40:41 2014 -0500
patches
commit f676c16aeaa12045ada87bfac1e223c2dba37d6b
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Mon Dec 29 22:35:49 2014 -0500
changelog, bdepends, min cython, cythonization
commit 390352863a9ef58e06eb384f9e40c30f55de8d00
Merge: af30ed55 b048445d
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Mon Dec 29 22:24:44 2014 -0500
Merge commit '0.7.0-1225-gb048445' into debian
* commit '0.7.0-1225-gb048445': (40 commits)
RF: use get_include instead of get_info
PEP8: remove extra blank lines
BF: /MANIFEST flag no longer needed
BF: explicitly request manifest creation to msvc
RF: remove check_npymath
BF: check definition of signbit directly
BF: NPY_HAVE_DECL_SIGNBIT is true but _signgit is undefined in vc runtime
BF: add npymath info but remove the library from linking
Add needed subset of numpy functions and remove npymath library from linking
BF: work round ugly MSVC manifest bug
BF: add more robust travis installs
RF: add setup_helpers.py to MANIFEST.in
BF: make some test directories into packages
BF: include_dirs for Cython pyx release compiles
RF: write config.h rather than config.pxi file
NF: add safe openmp header / Cython pxd
Broke long sentence
Readme.rst and info.py update about the license
Update README.rst
Added shore gpl warning
...
commit af30ed554c409d97ba5c729b606483fd7b7b773b
Merge: af03dc8a 871108e9
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Thu Dec 25 16:09:38 2014 -0500
Merge commit '0.7.1+git1173-g871108e' into debian
* commit '0.7.1+git1173-g871108e': (972 commits)
DOC: updated api changes
TST: Reduce sensitivity on these tests.
TST: Increasing testing on life.
DOC: updated api changes
DOC: typo correction
RF - update deterministic tracking example
RF - changed tabs to spaces
DOC - fixed typos
DOC - fixed typos
DOC - added example for deterministic maximum direction getter
RF - renamed MaximumDeterministicDirectionGetter to DeterministicMaximumDirectionGetter
Added info explaining that reslice is replacing resample
BF + TST: Reinstated eig_from_lo_tri
DOC: added contents and highlighted new example sections
DOC: added proper reference link from tracking_quick_start to new tracking API
DOC: repositioned tracking quick start in examples_index
BF: another fvtk 5 to 6 incompatibility
DOC: Small fixes in documentation.
Minor corrections
TEST: added noise estimation checks when interpolation changes
...
commit af03dc8a1ef07dc75947f2af93b69c22afa4868c
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Wed Aug 13 10:18:54 2014 -0400
Exclude peaksFromModelParallel from testing for now due to obscure permission issue
commit 51df36fa623d1becc53bf0477d26245812c2b78e
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Tue Aug 12 22:03:13 2014 -0400
uploading as is with Andreas changes
commit 860455d02b6bbe9d75b776eedd35872c734c887d
Author: Andreas Tille <tille@debian.org>
Date: Thu Jul 31 14:52:11 2014 +0200
Move publication data where they belong to
commit 3ab280ab61bf945ad37e7fe22165b57774a27158
Author: Andreas Tille <tille@debian.org>
Date: Thu Jul 31 14:27:26 2014 +0200
As frequently discussed "Priority: optional" should be used (except for debug or data packages)
commit fd1c79ea95be4865763dd7bc7f3337a9a41b6278
Author: Andreas Tille <tille@debian.org>
Date: Thu Jul 31 14:26:34 2014 +0200
Set Vcs fields to anonscm.debian.org
commit 6a4854ae3eee54a2f57fa598f15b10915dfaaa53
Author: Andreas Tille <tille@debian.org>
Date: Thu Jul 31 14:22:42 2014 +0200
Fix DEP5 format specification
commit 482341bd96dcfb6368af348cac97ff93a2057050
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Sun Jan 19 20:44:14 2014 -0500
adding up_AE_test_fixup_i386 to overcome test failures on 32bit
commit 37f84ecf8e4b11a7ee43eff1257e5c349afb817c
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Sun Jan 19 20:38:28 2014 -0500
updated cythonized files
commit d1454e5d7ce278c5122ea1ec728bb8a9e45635bc
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Fri Jan 17 13:52:24 2014 -0500
just use uscan to fetch the recent tarball release
commit cfc443d2993cc949a4f8fe1dbbeb4e4d18e040a5
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Fri Jan 17 09:45:37 2014 -0500
New upstream release -- dropping patches, boost policy
* New upstream release
* debian/patches
- dropping deb_interpreter_for_scripts_tests, changeset* patches --
adopted upstream
* debian/control
- boost policy to 3.9.5 (no further changes due)
commit c005afbe936c67bfaac3592a9779bd5888226c79
Merge: 7fb987d2 11d6aa48
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Fri Jan 17 09:37:18 2014 -0500
Merge tag '0.7.1' into debian
Fourth public release
* tag '0.7.1': (38 commits)
Updated version to 0.7.1
Updated Changelog and announcements
Corrected some rendering problems with the installation instructions
BF: more problems with path quoting in windows
BF: add .bat to windows script names
BF: quote python executable for windows scripts
BF: doctest example fixed in eudx.py
minor change
Changed order of parameters in script
BF: removed default sphere from EuDX
DOC: replaced Canopy with Anaconda in installation instructions
DOC: Fixes following comments from Stefan.
DOC: Link to easy_install.
DOC: Suggest using .exe installers instead.
DOC: we don't need dual targets. Caps taken care by the Sphinx.
DOC: Be little less gushing.
DOC: Formulation.
DOC: Some more details in installation instructions.
BF - callable response does not work and is not tested, taking it out for now so that it can be added back with tests and an example
DOC - better doc string for seeds_from_mask
...
commit 7fb987d2a14fb887f912bb0ecda31ff6deaa3c7b
Merge: c1f2a703 853ebccf
Author: Yaroslav Halchenko <debian@onerussian.com>
Date: Fri Jan 17 09:37:15 2014 -0500
Merge tag '0.7.0' into debian
Third public release
* tag '0.7.0': (780 commits)
Removed .dev from info.py
Updated info.py and copyright year
BF - change imports of urllib, urlparse for python3
BF - use urllib to turn path to url for better portability
Fixed typo.
Oh yes - we don't need itertools here anymore.
Import from six for py3k compatibility.
Added one-line description.
BF: Put back utils.length.
BF - forgot to read gtab for shore test
RF - reuse code for reading gradient table files and add taiwan dsi gradient table
TST - rework tests so that we do not need to download any data
PEP8.
More py2.6 compatibility.
Better explanation of value error
Extra safety
BF: copy with order not supported in older numpy of buildbots
BF: Deal with python2.6 issues.
Fixed snr estimation line
Removed some lines from README.txt because download all releases became unavailable in github
...
commit 11d6aa4871ddeb82ff55064f65e9ec8bf2e46661
Author: Eleftherios Garyfallidis <garyfallidis@gmail.com>
Date: Thu Jan 16 15:06:58 2014 -0500
Updated version to 0.7.1
commit 2bdf5e647d6a5275922c9f5a9c7a37dc89f1b910
Author: Eleftherios Garyfallidis <garyfallidis@gmail.com>
Date: Thu Jan 16 15:02:59 2014 -0500
Updated Changelog and announcements
commit ef60c5218efa9ee84e4c2bda2c58c6798b6ed793
Merge: 3cf8fd01 fdeab3a8
Author: Ariel Rokem <arokem@gmail.com>
Date: Thu Jan 16 11:40:53 2014 -0800
Merge pull request #318 from Garyfallidis/render_installation
Corrected some rendering problems with the installation instructions
commit fdeab3a81d613fc4c1eac7128113a2b299e09780
Author: Eleftherios Garyfallidis <garyfallidis@gmail.com>
Date: Thu Jan 16 14:38:22 2014 -0500
Corrected some rendering problems with the installation instructions
commit 3cf8fd01fa6fe931ad3a30ab6c9c4cdf9c311cf8
Merge: 67c323f8 da00fdce
Author: Ariel Rokem <arokem@gmail.com>
Date: Wed Jan 15 15:27:41 2014 -0800
Merge pull request #317 from matthew-brett/windows-script-fixes-3
BF: more problems with path quoting in windows
commit da00fdce0d322e02756439a58568b4d8f486cf0c
Author: Matthew Brett <matthew.brett@gmail.com>
Date: Wed Jan 15 14:18:10 2014 -0800
BF: more problems with path quoting in windows
For some reason, windows was losing the closing double quote for the python
path, making a confusing mess executing the scripts.
Try again with a longer way.
commit 67c323f800b55e387f9fa4f1dbcde9d02cb50983
Merge: 314b3430 a025fa87
Author: Ariel Rokem <arokem@gmail.com>
Date: Wed Jan 15 11:31:15 2014 -0800
Merge pull request #316 from matthew-brett/windows-script-fixes-2
MRG: more fixes for windows script tests
commit a025fa870a9160e807150b6303d04ea37f49d2ab
Author: Matthew Brett <matthew.brett@gmail.com>
Date: Wed Jan 15 11:18:57 2014 -0800
BF: add .bat to windows script names
Windows scripts need executable name, or shell=True. Add .bat to name.
commit c581d470fd41b4d4c8b19e235698376e1834e744
Author: Matthew Brett <matthew.brett@gmail.com>
Date: Wed Jan 15 11:17:31 2014 -0800
BF: quote python executable for windows scripts
Python executable can be in a path with spaces. Quote the discovered python
executable just in case.
commit 314b343042ae430736dfd55f14baeb709b7aebf8
Merge: d1e29f1c e1362429
Author: Ariel Rokem <arokem@gmail.com>
Date: Tue Jan 14 12:59:59 2014 -0800
Merge pull request #315 from Garyfallidis/eudx_sphere_param
BF: EuDX odf_vertices param has no default value
commit e136242980bdca5b5033d8f9ff294cd63aca48d2
Author: Eleftherios Garyfallidis <garyfallidis@gmail.com>
Date: Tue Jan 14 15:06:49 2014 -0500
BF: doctest example fixed in eudx.py
commit fbec518b2e8fc1dde36f432d414cfa423c525428
Author: Eleftherios Garyfallidis <garyfallidis@gmail.com>
Date: Tue Jan 14 13:59:55 2014 -0500
minor change
commit 21a0f48bf9909d102ac5e6e15a08b0d9502136e6
Author: Eleftherios Garyfallidis <garyfallidis@gmail.com>
Date: Tue Jan 14 11:13:23 2014 -0500
Changed order of parameters in script
commit 1e6b32b7bfa7a0e61396c0c7cf71e2838d6428a6
Author: Eleftherios Garyfallidis <garyfallidis@gmail.com>
Date: Mon Jan 13 21:13:47 2014 -0500
BF: removed default sphere from EuDX
commit d1e29f1c332ff9005a7b0565059b8890e3e807f1
Merge: c61589d6 a428406a
Author: Eleftherios Garyfallidis <garyfallidis@gmail.com>
Date: Mon Jan 13 17:54:47 2014 -0800
Merge pull request #305 from arokem/installation-instructions
DOC: Some more details in installation instructions.
commit c61589d630158f9dc92006b59dad5b6bf97754ba
Merge: 4ad26b8c ad08c6f6
Author: Ariel Rokem <arokem@gmail.com>
Date: Mon Jan 13 17:35:19 2014 -0800
Merge pull request #314 from MrBago/bf_remove_callable_response
BF - callable response does not work
commit a428406abaeee39bbfaeb7ff07fcb47cd83b09a8
Author: Eleftherios Garyfallidis <garyfallidis@gmail.com>
Date: Mon Jan 13 20:20:45 2014 -0500
DOC: replaced Canopy with Anaconda in installation instructions
commit 926636a5a9710e1c1327d0c03d4ee80ac5097b0a
Author: arokem <arokem@gmail.com>
Date: Sun Jan 5 14:16:16 2014 -0800
DOC: Fixes following comments from Stefan.
commit d84c83cd52e48ace6c6bc7b50f024f8b81c55b6e
Author: arokem <arokem@gmail.com>
Date: Sat Jan 4 08:18:09 2014 -0800
DOC: Link to easy_install.
commit 7edda7ab9950ab4e0d930c86aa70398af87689c9
Author: arokem <arokem@gmail.com>
Date: Sat Jan 4 08:17:02 2014 -0800
DOC: Suggest using .exe installers instead.
commit 9453f6bd6acbb9ddfe12b553003b33a1aeab34e5
Author: arokem <arokem@gmail.com>
Date: Sat Jan 4 07:45:22 2014 -0800
DOC: we don't need dual targets. Caps taken care by the Sphinx.
commit 6256f0a72bcca9978c3b0a80d00bfbf0d748420b
Author: arokem <arokem@gmail.com>
Date: Sat Jan 4 07:44:30 2014 -0800
DOC: Be little less gushing.
commit 249c3e7fbe5dc8e890eb78012d537aef2595f17c
Author: arokem <arokem@gmail.com>
Date: Sat Jan 4 07:35:17 2014 -0800
DOC: Formulation.
commit dd24824333bf380d0e0fca37e94242d5f37858d8
Author: arokem <arokem@gmail.com>
Date: Fri Jan 3 12:17:13 2014 -0800
DOC: Some more details in installation instructions.
commit 4ad26b8ce21fc84fd90c7ba7474b9a38aaad30a2
Merge: 471a72d8 c842092a
Author: Eleftherios Garyfallidis <garyfallidis@gmail.com>
Date: Mon Jan 13 17:04:48 2014 -0800
Merge pull request #311 from MrBago/bf_seeds_from_mask
Bf seeds from mask
commit ad08c6f6a8dbd648a269d549e9c30c585eee4ece
Author: Bago Amirbekian <mrbago@gmail.com>
Date: Mon Jan 13 16:50:31 2014 -0800
BF - callable response does not work and is not tested, taking it out
for now so that it can be added back with tests and an example
commit c842092adbae7ef29f7dafd2e9014c2fdd42c184
Author: Bago Amirbekian <mrbago@gmail.com>
Date: Sat Jan 11 11:46:37 2014 -0800
DOC - better doc string for seeds_from_mask
commit 0e439ed740d7dd2fb7702770e5182130228fff93
Author: Bago Amirbekian <mrbago@gmail.com>
Date: Sat Jan 11 11:30:50 2014 -0800
BF - fix reshape bug in seeds_from_mask
commit 3885b710408766c96f12aaae77b60a7d1a57d157
Author: Bago Amirbekian <mrbago@gmail.com>
Date: Sat Jan 11 12:06:32 2014 -0800
TST - some more tests for seeds_from_mask
commit 471a72d8ccf441bca75d0af1bb91a4b6a12d2f24
Merge: 997a7bdc 0baa342a
Author: Ariel Rokem <arokem@gmail.com>
Date: Fri Jan 10 16:35:55 2014 -0800
Merge pull request #309 from matthew-brett/windows-test-fixes
MRG: Windows test fixes
commit 0baa342a7dc5aac4aad792136c59fbc85172e33d
Author: Matthew Brett <matthew.brett@gmail.com>
Date: Fri Jan 10 19:11:46 2014 +0000
BF: ensure ravel_multi_index has good working type
Indices could overflow if input type of index array was not large
enough to hold large indices.
