ncbi-igblast (1.19.0-1)
[PTS] [DDPO]
NEW: VCS has unreleased changes: 1.20.0-1 > 1.19.0-1
- Git: https://salsa.debian.org/med-team/ncbi-igblast.git
-
- Branch: master
- Path: debian/changelog
- Repo size: 356352
- Browser: https://salsa.debian.org/med-team/ncbi-igblast
- Last scan: 2024-12-07 15:07:08+00
- Next scan: 2024-12-14 06:35:00+00
- CI pipeline status: failed
- Debian changelog in Git:
ncbi-igblast (1.20.0-1) UNRELEASED; urgency=medium
[ Andreas Tille ]
* Team upload.
* Fix lintian-overrides
* Recommends: ncbi-blast+
* Install edit_imgt_file.pl and c++/src/app/igblast/internal_data
* Build-Depends: libncbi-vdb-dev, drop --without-vdb option
* Do a more targeted build using --with-flat-makefile
* Standards-Version: 4.6.2 (routine-update)
* Update lintian override info format in d/source/lintian-overrides on line
4-6.
[ Aaron M. Ucko ]
* debian/igblast.install: Install correct build output.
* debian/patches/avoid-gcc-crash.patch (new): Work around a consistent
internal compiler error whose fix may run into the toolchain freeze:
https://gcc.gnu.org/bugzilla/show_bug.cgi?id=108137
* debian/rules:
- Add possibly relevant subtrees to VDB_INCLUDE.
- Enable optimization unless DEB_BUILD_OPTIONS contains noopt.
- Copy-hack clean logic from ncbi-blast+.
[ Michael R. Crusoe ]
* build-dep on procps for the "ps" command.
-- Aaron M. Ucko <ucko@debian.org> Sun, 22 Jan 2023 13:39:13 -0500
- This branch is 19 commits ahead of tag debian/1.19.0-1
- Git log:
commit 727b720e6ef15b7a7a06fe352f57b3abd980b449
Author: Michael R. Crusoe <crusoe@debian.org>
Date: Wed Feb 8 10:52:38 2023 +0100
build-dep on procps for the "ps" command.
commit 3544c545c3932daf3404e73396fd7e27fc24f8a8
Author: Aaron M. Ucko <ucko@debian.org>
Date: Sun Jan 22 13:39:14 2023 -0500
debian/igblast.install: Install correct build output.
commit 8932193af1cf759393bab4163209fb1a875a8480
Author: Aaron M. Ucko <ucko@debian.org>
Date: Fri Jan 20 17:30:48 2023 -0500
debian/rules: Fix ifeq syntax.
commit 5dbd0ce570f921053441fb3c14d1274d8a827049
Author: Aaron M. Ucko <ucko@debian.org>
Date: Fri Jan 20 17:20:23 2023 -0500
debian/rules: Copy-hack clean logic from ncbi-blast+.
commit 3ea3684a369cc4d9ad88041273ed7d3ddb5b5249
Author: Aaron M. Ucko <ucko@debian.org>
Date: Fri Jan 20 17:14:51 2023 -0500
Enable optimization unless DEB_BUILD_OPTIONS contains noopt.
commit cdaf8ca508da57dad0c14fa143619e5eff03e291
Author: Aaron M. Ucko <ucko@debian.org>
Date: Fri Jan 20 17:10:25 2023 -0500
debian/rules: Add possibly relevant subtrees to VDB_INCLUDE.
commit 7f9c4ebe015e7e42a311d568c84052886f31a3da
Author: Aaron M. Ucko <ucko@debian.org>
Date: Fri Jan 20 17:06:42 2023 -0500
avoid-gcc-crash.patch (new): Work around a consistent ICE
... whose fix may run into the toolchain freeze:
https://gcc.gnu.org/bugzilla/show_bug.cgi?id=108137
commit f1b140f84d26166d4fa75eb072276a3a118f092d
Author: Andreas Tille <tille@debian.org>
Date: Thu Jan 19 20:56:00 2023 +0100
Update lintian override info format in d/source/lintian-overrides on line 4-6.
Changes-By: lintian-brush
Fixes: lintian: mismatched-override
See-also: https://lintian.debian.org/tags/mismatched-override.html
commit 0269475da931f33746fc6865d9e399478593b033
Author: Andreas Tille <tille@debian.org>
Date: Thu Jan 19 20:55:53 2023 +0100
routine-update: Standards-Version: 4.6.2
commit 235abb0d28d8440da6451787b2dcf077b28e9f7f
Merge: 4e73a25 b8c27a6
Author: Andreas Tille <tille@debian.org>
Date: Thu Jan 19 20:55:52 2023 +0100
Update upstream source from tag 'upstream/1.20.0'
Update to upstream version '1.20.0'
with Debian dir bdf20f26266179ce804f9702c2e02a3f433fc8e1
commit b8c27a6ed537f6e43d10388326a104c1c4b60e21
Author: Andreas Tille <tille@debian.org>
Date: Thu Jan 19 20:53:57 2023 +0100
New upstream version 1.20.0
commit 4e73a257b891c4bae28d9b5fbb3db7e255661b2e
Author: Andreas Tille <tille@debian.org>
Date: Thu Jan 19 20:53:56 2023 +0100
routine-update: New upstream version
commit 4d8bbf60775b3cec414670ec3851152bde62280d
Author: Andreas Tille <tille@debian.org>
Date: Thu Aug 4 06:41:00 2022 +0200
Commit what was supposed to work
commit b37949a7d94e590a26e6e72ffe5e0b6fce552f0f
Author: Andreas Tille <tille@debian.org>
Date: Wed Aug 3 21:02:40 2022 +0200
Try to adjust configure options
commit df2f1ccaf9bd67f8d48134ead4f4bcde200aacc2
Author: Andreas Tille <tille@debian.org>
Date: Tue Aug 2 10:38:09 2022 +0200
Follow hint of Aaron given here https://lists.debian.org/debian-med/2022/08/msg00005.html
commit c70ea988bf68ca4bfe761244cb585a8c27c671fe
Author: Andreas Tille <tille@debian.org>
Date: Tue Aug 2 10:16:23 2022 +0200
Build-Depends: libncbi-vdb-dev, drop --without-vdb option + add debug code
commit 1cc2481fd43655573efb3d4d18df8fc5a21715a8
Author: Andreas Tille <tille@debian.org>
Date: Mon Aug 1 13:43:52 2022 +0200
Install edit_imgt_file.pl and c++/src/app/igblast/internal_data
commit 54ca131f85f0910aad3ad056a2fd499f81951ccd
Author: Andreas Tille <tille@debian.org>
Date: Mon Aug 1 13:38:40 2022 +0200
Recommends: ncbi-blast+
commit 0dfecb5631d5ae763a51d97cd60ca1b4c6ccedd3
Author: Andreas Tille <tille@debian.org>
Date: Sat Jul 30 09:46:05 2022 +0200
Fix lintian-overrides, review copyright