snakemake (7.12.1-1) [PTS] [DDPO]

NEW: VCS has unreleased changes: 7.18.2-1 > 7.12.1-1

Git: https://salsa.debian.org/med-team/snakemake.git
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Branch: master
Path: debian/changelog
Browser: https://salsa.debian.org/med-team/snakemake
Last scan: 2022-12-05 21:33:28+00
Next scan: 2022-12-14 08:13:00+00
CI pipeline status: failed

Debian changelog in Git:

snakemake (7.18.2-1) UNRELEASED; urgency=medium

  * Team upload.
  * Fix watch file
  TODO: Wait until https://salsa.debian.org/python-team/packages/python-throttler is accepted in new
  TODO2: Remaining failure:
  =================================== FAILURES ===================================
  ____________________________ test_workflow_calling _____________________________

      def test_workflow_calling():
          with tempfile.TemporaryDirectory() as tmpdir:
              path = os.path.join(tmpdir, "Snakefile")
              with open(path, "w") as f:
                  print(
                      dedent(
                          """
                      rule:
                          output: 'result.txt'
                          run:
                              with open(output[0], 'w') as f:
                                  print("hello", file=f)
                      """
                      ),
                      file=f,
                  )
  >           workflow = Workflow(
                  snakefile=snakefile,
                  overwrite_workdir=tmpdir,
              )
  E           NameError: name 'Workflow' is not defined


 -- Andreas Tille <tille@debian.org>  Tue, 29 Nov 2022 16:17:21 +0100

This branch is 7 commits ahead of tag debian/7.12.1-1

Git log:

commit 165748c6d5984ba7b84a5ed9172b7c69a5f8ebde
Author: Andreas Tille <tille@debian.org>
Date:   Tue Nov 29 17:36:45 2022 +0100

    Add TODO

commit de5ba8b6ce5f5dfa30f4281255de1d286b45d1df
Author: Andreas Tille <tille@debian.org>
Date:   Tue Nov 29 16:29:16 2022 +0100

    Refresh patches

commit c9938fae68c33847dba42097f24cdd3fab9d1b08
Author: Andreas Tille <tille@debian.org>
Date:   Tue Nov 29 16:18:24 2022 +0100

    Apply multi-arch hints.
    + snakemake-doc: Add Multi-Arch: foreign.
    
    Changes-By: apply-multiarch-hints

commit 1fb519b1b38805a6fd15d4b3e303a8d5c5eddd41
Merge: c6db3e7 ffe21d5
Author: Andreas Tille <tille@debian.org>
Date:   Tue Nov 29 16:18:07 2022 +0100

    Update upstream source from tag 'upstream/7.18.2'
    
    Update to upstream version '7.18.2'
    with Debian dir 174ef2a446670ac92ed3666c9ee7920fa49ae2a3

commit ffe21d5422616de04c2d78c67ba8df236c718ac9
Author: Andreas Tille <tille@debian.org>
Date:   Tue Nov 29 16:17:47 2022 +0100

    New upstream version 7.18.2

commit c6db3e7b9b3f96b7d1763cabfbb5f9d564cf64e8
Author: Andreas Tille <tille@debian.org>
Date:   Tue Nov 29 16:17:46 2022 +0100

    routine-update: New upstream version

commit 0a389e41f54cc9d1a8a33f5bc22f696e455f336c
Author: Andreas Tille <tille@debian.org>
Date:   Tue Nov 29 16:17:31 2022 +0100

    Fix watch file